patentr - Access USPTO Bulk Data in Tidy Rectangular Format
Converts TXT and XML data curated by the United States Patent and Trademark Office (USPTO). Allows conversion of bulk data after downloading directly from the USPTO bulk data website, eliminating need for users to wrangle multiple data formats to get large patent databases in tidy, rectangular format. Data details can be found on the USPTO website <https://bulkdata.uspto.gov/>. Currently, all 3 formats: 1. TXT data (1976-2001); 2. XML format 1 data (2002-2004); and 3. XML format 2 data (2005-current) can be converted to rectangular, CSV format. Relevant literature that uses data from USPTO includes Wada (2020) <doi:10.1007/s11192-020-03674-4> and Plaza & Albert (2008) <doi:10.1007/s11192-007-1763-3>.
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patentpatent-datapatentsr-programmingusptocpp
4.70 score 10 stars 5 scripts 242 downloadshelixvis - Visualize Alpha-Helical Peptide Sequences
Create publication-quality, 2-dimensional visualizations of alpha-helical peptide sequences. Specifically, allows the user to programmatically generate helical wheels and wenxiang diagrams to provide a bird's eye, top-down view of alpha-helical oligopeptides. See Wadhwa RR, et al. (2018) <doi:10.21105/joss.01008> for more information.
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biochemistryhelical-wheelspeptide-sequencesvisualizationwenxiang-diagrams
4.00 score 2 stars 3 scripts 133 downloadsfitscape - Classes for Fitness Landscapes and Seascapes
Convenient classes to model fitness landscapes and fitness seascapes. A low-level package with which most users will not interact but upon which other packages modeling fitness landscapes and fitness seascapes will depend.
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3.18 score 1 dependents 2 scripts 175 downloadsdragonking - Statistical Tools to Identify Dragon Kings
Statistical tests and test statistics to identify events in a dataset that are dragon kings (DKs). The statistical methods in this package were reviewed in Wheatley & Sornette (2015) <doi:10.2139/ssrn.2645709>.
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3.00 score 2 stars 6 scripts 121 downloads